2017

mardi 3 octobre 2017

Les publications illustrent les collaborations scientifiques au sein de la FR BioEnviS.
Elles sont portées par au moins 2 unités de la FR et/ou ont bénéficié des services des plateformes de celle-ci.

Amiot R., Wang X., Wang S., Lécuyer C., Mazin J.M., Mo J., Flandrois J.P., Fourel F., Wang X., Xu X., Zhang Z. and Zhou, Z. d18o-Derived incubation temperatures of oviraptorosaur eggs. Palaeontology, 60 : 633-6.

Bardon C., Poly F., Haichar Z., Le Roux X., Simon L., Meiffren G., Comte G., Rouifed S. and Piola F. Biological denitrification inhibition (BDI) with procyanidins induces modification of root traits, growth and N status in Fallopia x bohemica. Soil Biology & Biochemistry, 107 : 41-49.

Cayuela H., Léna J.P., Lengagne T., Kaufmann B., Mondy N., Konecny L., Dumet A., Vienney A. and Joly P. Relatedness predicts male mating success in a pond-breeding amphibian. Animal Behaviour, 130 : 251-261.

Cayuela H., Lengagne T., Joly P. and Léna J.P. Females trade off the uncertainty of breeding resource suitability with male quality during mate choice in an anuran. Animal Behaviour, 123 : 179-185.

Denet E., Coupat-Goutaland B., Nazaret S., Pelandakis M. and Favre-Bonte S. Diversity of free-living amoebae in soils and their associated human opportunistic bacteria, Parasitology Research, 116 : 3151-3162. 

Desprat J.L., Lengagne T. and Mondy, N. Immune challenges and visual signalling in tree frogs. The Science of Nature, 104(21) : 1-9.

Desprat J.L., Mondy N. and Lengagne, T. Does testosterone affect foraging behavior in male frogs ? Hormones and Behavior, Hormones and Behavior, 90 : 25–30.

Desprat J.L., Teulier L., Puijalon S., Dumet A., Romestaing C., Tattersall, G.J. Lengagne, T. and Mondy N. Doping for sex : bad for mitochondrial performances ? Case of testosterone supplemented Hyla arborea during the courtship period. Comparative Biochemistry and Physiology Part A, 209 : 74-83.

Faucon F., Gaude T., Dusfour I., Navratil V., Corbel V., Juntarajumnong W., Girod R., Poupardin R., Boyer F., Reynaud S. and David J.P. In the hunt for genomic markers of metabolic resistance to pyrethroids in the mosquito Aedes aegypti : an integrated next-generation sequencing approach. PLoS Negl. Trop. Dis., 11(4) : e0005526.

Galia W., Leriche F., Cruveiller S., Garnier C., Navratil V., Dubost A., Blanquet-Diot S. and Thevenot-Sergentet D. Strand-specific transcriptomes of Enterohemorrhagic Escherichia coli in response to interactions with ground beef microbiota : interactions between microorganisms in raw meat. BMC Genomics, 18(1) : 574.

Gilles L.M., Khaled A., Laffaire J., Chaignon S., Gendrot G., Laplaige J., Bergès H., Beydon G., Bayle V., Barret P., Comadran J., Martinant J.P., Rogowsky P.M. and Widiez T. Loss of pollen_specific phospholipase NOT LIKE DAD triggers gynogenesis in maize. The EMBO Journal, 36 : 707-717.

Goubert C., Henri H., Minard G., Valiente Moro C., Mavingui P., Vieira C. and Boulesteix M. High-throughput sequencing of transposable element insertions suggests adaptive evolution of the invasive Asian tiger mosquito towards temperate environments. Molecular ecology, 26 : 3968-3981.

Guyonnet J.P., Vautrin F., Meiffren G., Labois C., Cantarel A.A.M., Michalet S., Comte G. and Haichar FEZ. The effects of plant nutritional strategy on soil microbial denitrification activity through rhizosphere primary metabolites. FEMS Microbiology Ecology, 93(4).

Habbadi K., Meyer T., Vial L., Gaillard V., Benkirane R., Benbouazza A., Kerzaon I., Achbani E.H. and Lavire C. Essential oils of Origanum compactum and Thymus vulgaris exert a protective effect against the phytopathogen Allorhizobium vitis. Environmental science and pollution research international, 30 : 29943-29952.

Lamberti-Raverot B., Piola F., Thiébaut M., Guillard L., Vallier F. and Puijalon S. Water dispersal of the invasive complex Fallopia : the role of achene morphology. Flora, 234 : 150-157.

Lassalle F., Planel R., Penel S., Chapulliot D., Barbe V., Dubost A., Calteau A., Vallenet D., Mornico D., Bigot T., Guéguen L., Vial L., Muller D., Daubin V. and Nesme X. Ancestral genome estimation reveals the history of ecological diversification in Agrobacterium. Genome Biology and Evolution, 9 : 3413-3431.

Lefebure T., Morvan C., Malard F., Francois C., Konecny-Dupre L., Gueguen L., Weiss-Gayet M., Seguin-Orlando A., Ermini L., Sarkissian C., Charrier N.P., Eme D., Mermillod-Blondin F., Duret L., Vieira C., Orlando L. and Douady C.J. Less effective selection leads to larger genomes. Genome research, 27 : 1016-1028.

Lengagne T., Voituron Y. and Gomez D. Male within-individual variability in a sexual signal component and its impact on female choice. Behavioral Ecology, 28(1) : 108-116.

Lerat E., Fablet M., Modolo L., Lopez-Maestre H. and Vieira C. TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes. Nucleic Acids Res., 45(4) : e17.

Lima L., Sinaimeri B., Sacomoto G., Lopez-Maestre H., Marchet C., Miele V., Sagot MF. and Lacroix V. Playing hide and seek with repeats in local and global de novo transcriptome assembly of short RNA-seq reads. Algorithms Mol Biol., 12 : 2.

Lopez-Madrigal S., Maire J., Balmand S., Zaidman-Rémy A. and Heddi A. Effects of symbiotic status on cellular immunity dynamics in Sitophilus oryzae. Dev. Compar. Immunol., 77 : 259e269.

Lopez-Maestre H., Carnelossi EAG., Lacroix V., Burlet N., Mugat B., Chambeyron S., Carareto CMA. and Vieira C. Identification of misexpressed genetic elements in hybrids between Drosophila-related species. Sci Rep. 7 : 40618.

Malard F., Capderrey C., Churcheward B., Eme D., Kaufmann B., Konecny-Dupré L., Léna J.-P., Liébault F. and Douady C. Geomorphic influence on intraspecific genetic differentiation and diversity along hyporheic corridors. Freshwater Biology, 62 : 1955-1970.

Michalet S., Rouifed S., Pellassa-Simon T., Fusade-Boyer M., Meiffren G., Nazaret S. and Piola, F. Tolerance of Japanese Knotweed s.l. to soil artificial polymetallic pollution : early metabolic responses and performance during vegetative multiplication. Environmental Science and Pollution Research, 24(26) : 20897–20907.

Oger P.M., Callac N., Oger-Desfeux C., Hughes S., Gillet B., Jebbar M. and Godfroy A. Complete genome sequence of the hyperthermophilic piezophilic archaeon Pyrococcus kukulkanii NCB100 isolated from the Rebecca’s Roost hydrothermal vent in the Guaymas basin. Genome Announc., 5(7) : e01667-16.

Pages-Monteiro L., Marti R., Commun C., Alliot N., Bardel C., Meugnier H., Perouse-de-Montclos M., Reix P., Durieu I., Durupt S., Vandenesch F., Freney J., Cournoyer B. and Doleans-Jordhein A. Strong incidence of Pseudomonas aeruginosa on bacterial rrs and ITS genetic structures of cystic fibrosis sputa. PLOS One, 12(3) : e0173022.

Parto S. and Lartillot N. Detecting consistent patterns of directional adaptation using differential selection codon models. BMC Evol Biol., 17 : 147.

Pham HN., Michalet S., Bodillis J. and Nguyen TD. Impact of metal stress on the production of secondary metabolites in Pteris vittata L. and associated rhizosphere bacterial communities. Environmental Science and Pollution Research, 24 : 16735-16750.

Philippon H., Souvane A., Brochier-Armanet C. and Perrière G. IsoSel : Protein Isoform Selector for phylogenetic reconstructions. PLoS One, 12(3) : e0174250.

Pouyet F., Mouchiroud D., Duret L. and Sémon M. Recombination, meiotic expression and human codon usage. eLife, 6 : e27344.

René-Martellet M., Minard G., Massot R., Valiente Moro C., Chabanne L. and Mavingui P. Bacterial microbiota associated with Rhipicephalus sanguineus (sl) ticks from France, Senegal and Arizona. Parasites & vectors, 10 : 416.

Rendu Q., Mignot E., Riviere N., Lamberti-Raverot B., Puijalon S. and Piola F. Laboratory investigation of Fallopia x bohemica fruits dispersal by watercourses. Environmental Fluid Mechanics, 17 : 1051–1065.

Rey B., Duchamp C. and Roussel D. Uncoupling effect of palmitate is exacerbated in skeletal muscle mitochondria of sea-acclimatized king penguins (Aptenodytes patagonicus) . Comparative biochemistry and physiology A, 211 : 56-60.

Rozier C., Hamzaoui J., Lemoine D., Czarnes S. and Legendre L. Field-based assessment of the mechanism of maize yield enhancement by Azospirillum lipoferum CRT1. Scientific Reports, 7 : 7416.

Saucereau Y., Valiente Moro C., Dieryckx C., Dupuy J.W., Tran F.H., Girard V., Potier P. and Mavingui P. Comprehensive proteome profiling in Aedes albopictus to decipher Wolbachia-arbovirus interference phenomenon, BMC genomics, 18 : 635. 

Saudemont B., Popa A., Parmley JL., Rocher V., Blugeon C., Necsulea A., Meyer E. and Duret L. The fitness cost of mis-splicing is the main determinant of alternative splicing patterns. Genome Biol., 18 : 208.

Schwob G., Roy M., Manzi S., Pommier T. and Fernandez M.P. Green alder (Alnus viridis) encroachment shapes microbial communities in subalpine soils and impacts its bacterial or fungal symbionts differently. Environ Microbiol., 19(8) : 3235-3250.

Simonin M., Martins JMF., Le Roux X., Uzu G., Calas A. and Richaume A. Toxicity of TiO2 nanoparticles on soil nitrification at environmentally relevant concentrations : Lack of classical dose–response relationships. Nanotoxicology, 11 : 247-255.

Troïanowski M., Mondy N., Dumet A., Arcanjo C. and Lengagne T. Effects of traffic noise on tree frog stress levels, immunity, and color signaling. Conservation Biology, 31(5) : 1132-1140.

Venner S., Miele V., Terzian C., Biémont C., Daubin V., Feschotte C. and Pontier D. Ecological networks to unravel the routes to horizontal transposon transfers. PLoS Biol., 15(2) : e2001536.

Voituron Y., Josserand R., Le Galliard J.F., Haussy C., Roussel D., Romestaing C. and Meylan S. Chronic stress, energy transduction, and free-radical production in a reptile. Oecologia, 185(2) : 195-203.


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  • 2017