mardi 3 octobre 2017

Les publications illustrent les collaborations scientifiques au sein de la FR BioEnviS.
Elles sont portées par au moins 2 unités de la FR et/ou ont bénéficié des services des plateformes de celle-ci.

Amiot, R., Wang, X., Wang, S., Lécuyer, C., Mazin, J.M., Mo, J., Flandrois J.P., Fourel, F., Wang, X., Xu, X., Zhang, Z., Zhou, Z., 2017 - d18o-Derived incubation temperatures of oviraptorosaur eggs. Palaeontology : 1–15.

Alvaro Tena, G. Seignemartin, G. Roux, T. Winiarski, H. Piégay, 2017. Factors controlling groyne-field sedimentation and contamination along the Rhône River. 3rd international Conference on the status and future of the World’s large rivers. 18-21 April 2017. New Delhi, Inde.

Bardon, C., Poly, F., Haichar, Z., Le Roux, X., Simon, L., Meiffren, G., Comte, G., Rouifed, S., Piola, F., 2017 - Biological denitrification inhibition (BDI) with procyanidins induces modification of root traits, growth and N status in Fallopia x bohemica. Soil Biology & Biochemistry 107 : 41-49

Denet E, Coupat-Goutaland B, Nazaret S, Pelandakis M, Favre-Bonte S (2017), Diversity of free-living amoebae in soils and their associated human opportunistic bacteria, Parasitology Research, vol. 116 pp.3151-3162 , doi : 10.1007/s00436-017-5632-6

Eyraud V, Balmand S, Karaki L, Rahioui I, Sivignon C, Delmas AF, Royer C, Rahbe Y, Da Silva P, Gressent F (2017), The interaction of the bioinsecticide PA1b (Pea Albumin 1 subunit b) with the insect V-ATPase triggers apoptosis, Scientific Reports, vol. 7 pp.4902 , doi : 10.1038/s41598-017-05315-y.

Faucon F., Gaude T., Dusfour I., Navratil V., Corbel V., Juntarajumnong W., Girod R., Poupardin R., Boyer F., Reynaud S., David J.P. (2017) In the hunt for genomic markers of metabolic resistance to pyrethroids in the mosquito Aedes aegypti : an integrated next-generation sequencing approach. PLoS Negl. Trop. Dis., 11(4):e0005526.

Frédéric Paran, Didier Graillot, Florent Arthaud, Gudrun Bornette, Marion Chatelier, et al.. Guide technique Interactions nappe/rivière : Des outils pour comprendre et mesurer les échanges. France. 102 p., 2017, Guide et protocoles, 978-2-37785-003-7. 〈hal-01570727〉

Galia W., Leriche F., Cruveiller S., Garnier C., Navratil V., Dubost A, Blanquet-Diot S., Thevenot-Sergentet D. (2017) Strand-specific transcriptomes of Enterohemorrhagic Escherichia coli in response to interactions with ground beef microbiota : interactions between microorganisms in raw meat. BMC Genomics, 18(1):574.

Gilles, L.M., Khaled, A., Laffaire, J., Chaignon, S., Gendrot, G., Laplaige, J., Bergès, H., Beydon, G., Bayle, V., Barret, P., Comadran J, Martinant JP, Rogowsky PM, Widiez, T (2017). Loss of pollen‐specific phospholipase NOT LIKE DAD triggers gynogenesis in maize. The EMBO Journal 36, 707-717.

Gippet, J.M.W., Mondy, N., Diallo-Dudek, J., Bellec, A., Dumet, A., Mistler, L., Kaufmann, B. Urban Ecosystems 20(1) : 157-169

Goubert C, Henri H, Minard G, Valiente Moro C, Mavingui P, Vieira C, Boulesteix M (2017) High-throughput sequencing of transposable element insertions suggests adaptive evolution of the invasive Asian tiger mosquito towards temperate environments. Molecular ecology, 26, 3968-3981.

Guyonnet JP, Vautrin F, Meiffren G, Labois C, Cantarel AAM, Michalet S, Comte G, Haichar FEZ. 2017. The effects of plant nutritional strategy on soil microbial denitrification activity through rhizosphere primary metabolites. FEMS Microbiology Ecology 93(4)

Habbadi K., Meyer T., Vial L., Gaillard V., Benkirane R., Benbouazza A., Kerzaon I., Achbani E.H., Lavire C. 2017. Essential oils of Origanum compactum and Thymus vulgaris exert a protective effect against the phytopathogen Allorhizobium vitis. Environmental science and pollution research international. doi : 10.1007/s11356-017-1008-9.

Hay De-Bettignies AE, Boubakri H, Buonomo A, Rey M, Meiffren G, Cotin-Galvan L, Comte G, Herrera-Belaroussi A. 2017. Control of endophytic Frankia sporulation by Alnus nodule metabolites. Mol Plant Microbe Interact. doi : 10.1094/MPMI-11-16-0235-R.

Lamberti-Raverot, B., Piola, F., Thiébaut, M., Guillard, L., Vallier, F., Puijalon, S. 2017. Water dispersal of the invasive complex Fallopia : the role of achene morphology. Flora, 234 : 150-157.

Lassalle, F., Planel, R., Penel, S., Chapulliot, D., Barbe, V., Dubost, A., Calteau, A., Vallenet, D., Mornico, D., Bigot, T., Guéguen, L., Vial, L., Muller, D., Daubin, V., Nesme, X. 2017. Ancestral genome estimation reveals the history of ecological diversification in Agrobacterium. Genome Biology and Evolution 9:3413-3431.

Lefebure T, Morvan C, Malard F, Francois C, Konecny-Dupre L, Gueguen L, Weiss-Gayet M, Seguin-Orlando A, Ermini L, Sarkissian C, Charrier N P, Eme D, Mermillod-Blondin F, Duret L, Vieira C, Orlando L, Douady CJ (2017) Less effective selection leads to larger genomes. Genome research, 27, 1016-1028.

Marti R, Ribun S, Aubin J-B, Colinon C, Petit S, Marjolet L, Gourmelon M, Schmitt L, Breil P, Cottet M and Cournoyer B (2017) Human-Driven Microbiological Contamination of Benthic and Hyporheic Sediments of an Intermittent Peri-Urban River Assessed from MST and 16S rRNA Genetic Structure Analyses. Front. Microbiol. 8:19. doi : 10.3389/fmicb.2017.00019

Michalet, S., Rouifed, Pellassa-Simon, T., Fusade-Boyer, M., Meiffren, G., Nazaret, S., Piola, F. 2017. Tolerance of Japanese Knotweed s.l. to soil artificial polymetallic pollution : early metabolic responses and performance during vegetative multiplication". Environmental Science and Pollution Research, 24(26) : 20897–20907.

Oger P.M., Callac N., Oger-Desfeux C., Hughes S., Gillet B., Jebbar M., Godfroy A. (2017) Complete genome sequence of the hyperthermophilic piezophilic archaeon Pyrococcus kukulkanii NCB100 isolated from the Rebecca’s Roost hydrothermal vent in the Guaymas basin. Genome Announc., 5(7):e01667-16.

Pages-Monteiro L., Marti R., Commun C., Alliot N., Bardel C., Meugnier H., Perouse-de-Montclos M., Reix P., Durieu I., Durupt S., Vandenesch F., Freney J., Cournoyer B., Doleans-Jordhein A. 2017. Strong incidence of Pseudomonas aeruginosa on bacterial rrs and ITS genetic structures of cystic fibrosis sputa. PLOS One, 12(3) : e0173022

Rendu, Q., Mignot, E., Riviere, N., Lamberti-Raverot, B., Puijalon, S. Piola, F. 2017. Laboratory investigation of Fallopia x bohemica fruits dispersal by watercourses. Environmental Fluid Mechanics, 17 : 1051–1065.

Rey B., Ducham C., Roussel D. (2017) Uncoupling effect of palmitate is exacerbated in skeletal muscle mitochondria of sea-acclimatized king penguins (Aptenodytes patagonicus). Comparative biochemistry and physiology A 211, 56-60..

Rozier, C., Hamzaoui, J., Lemoine, D., Czarnes, S., Legendre, L. 2017. Field-based assessment of the mechanism of maize yield enhancement by Azospirillum lipoferum CRT1. Scientific Reports 7 : 7416

Saucereau Y, Valiente Moro C, Dieryckx C, Dupuy JW, Tran FH, Girard V, Potier P, Mavingui P(2017), Comprehensive proteome profiling in Aedes albopictus to decipher Wolbachia-arbovirus interference phenomenon, BMC genomics, vol. 18 pp.635 , doi : 10.1186/s12864-017-3985-y.

Schwob G, Roy M, Manzi S, Pommier T, Fernandez MP. 2017. Green alder (Alnus viridis) encroachment shapes microbial communities in subalpine soils and impacts its bacterial or fungal symbionts differently. Environ Microbiol. doi : 10.1111/1462-2920.13818.

Seignemartin G., H. Piégay, A. Tena, T. Winiarski, G. Roux, 2017. Sedimentation and contamination patterns of dike systems along the Rhône River (France, Session HS9.6 Quantifying erosion, sediment and contaminant redistribution in river basins. 19th EGU General Assembly, EGU2017, 23-28 April, 2017 in Vienna, Austria.

Thorel M., H Piégay, C Barthelemy, B Räpple, CR Gruel, P Marmonier, T Winiarski, JP Bedell, F Arnaud, G Roux, JC Stella, G Seignemartin, A Tena, V Wawrzyniak, D Roux-Michollet, B Oursel, S Fayolle, C Bertrand, E Franquet. Soumis. Socio-environmental stakes associated with process-based restoration strategies in large rivers : should we remove novel ecosystems along the Rhône ? IN REVIEW (last round). Regional Environmental Change (Special issue labex DRIIHM – OHM)

Vacheron, J, Desbrosses G, Renoud S, Padilla R, Walker V, Muller D, Prigent-Combaret C. 2017. Differential contribution of plant-beneficial functions from Pseudomonas kilonensis F113 to root system Architecture Alterations in Arabidopsis thaliana and Zea mays. Molecular Plant-Microbe Interaction MPMI07170185R.


Articles de la rubrique

  • 2017