2014

jeudi 14 septembre 2017

Les publications illustrent les collaborations scientifiques au sein de la FR BioEnviS.
Elles sont portées par au moins 2 unités de la FR et/ou ont bénéficié des services des plateformes de celle-ci.

Bardon C., Piola F., Bellvert F., Haichar F.Z., Comte G., Meiffren G., Pommier T., Puijalon S., Tsafack N. and Poly F. Evidence for biological denitrification inhibition (BDI) by plant secondary metabolites. New Phytol., 204(3) : 620-30.

Besnard F., Refahi Y., Morin V., Marteaux B., Brunoud G., Chambrier P., Rozier F., Mirabet V., Legrand J., Laine S., Thevenon E., Farcot E., Cellier C., Das P., Bishopp A., Dumas R., Parcy F., Helariutta Y., Boudaoud A., Godin C., Traas J., Guedon Y. and Vernoux T. Cytokinin signalling inhibitory fields provide robustness to phyllotaxis. Nature, 505, 417-421.

Bouffaud M.-L, Poirier M.-A., Muller D. and Moënne-Loccoz Y. Root microbiome relates to plant host evolution in maize and other Poaceae. Environmental Microbiology, 1462-2920.12442.

Campillo T., Renoud S., Kerzaon I., Vial L., Baude J., Gaillard V., Bellvert F., Chamignon C., Comte G., Nesme X., Lavire C. and Hommais F. Analysis of hydroxycinnamic acid degradation in Agrobacterium fabrum reveals a coenzyme A-dependent, beta-oxidative deacetylation pathway. Appl Environ Microbiol., 11:3341-9.

Cayuela H., Besnard A., Bonnaire E., Perret H., Rivoalen J., Miaud C. and Joly P. To breed or not to breed : past reproductive status and environmental cues drive current breeding decisions in a long‐lived amphibian. Oecologia, 176 : 107–116. 

Chevret P., Robinson T.J., Perez J., Veyrunes F. and Britton-Davidian J. A Phylogeographic Survey of the Pygmy Mouse Mus minutoides in South Africa : Taxonomic and Karyotypic Inference from Cytochrome b Sequences of Museum Specimens. PLoS One, 9(6) : e9849.

David J.P., Faucon F., Chandor-Proust A., Poupardin R., Riaz M.A., Bonin A., Navratil V. and Reynaud S. Comparative analysis of response to selection with three insecticides in the dengue mosquito Aedes aegypti using mRNA sequencing. BMC Genomics, 15, 174.

Després L., Stalinski R., Faucon F., Navratil V., Viari A., Paris M., Tetreau G., Poupardin R., Asam Riaz M., Bonin A., Reynaud S., David J.P. Chemical and biological insecticides select distinct gene expression patterns in Aedes aegypti mosquito. Biol. Lett., 10, 20140716.

Després L., Stalinski R., Tetreau G., Paris M., Bonin A., Navratil N., Reynaud S. and David J.P. Gene expression patterns and sequence polymorphisms associated with mosquito resistance to Bacillus thuringiensis israelensis toxins. BMC Genomics, 15, 926.

Dole-Olivier M.J., Maazouzi C., Cellot B., Fiers F., Galassi D.M.P., Claret C., Martin D., Mérigoux S. and Marmonier P. Assessing invertebrate assemblages in the subsurface zone of stream sediments (0–15 cm deep) using a hyporheic sampler. Water Resources Research, 50 : 1-13.

Donn S. Almario J., Muller D., Moënne-Loccoz Y., Gupta V.V.S., Kirkegaard J.A. and Richardson A.E. Rhizosphere microbial communities associated with Rhizoctonia damage at the field and disease patch scale. Applied Soil Ecology, 78 : 37-47.

Dray S., Choler P., Dolédec S., Peres-Neto P.R., Thuiller W., Pavoine S. and Ter Braak C.J.F. Combining the fourth-corner and the RLQ methods for assessing trait responses to environmental variation. Ecology, 95(1) : 14–21.

Drogue B., Sanguin H., Borland S., Prigent-Combaret C. and Wisniewski-Dyé F. Genome wide profiling of Azospirillum lipoferum 4B gene expression during interaction with rice roots. FEMS Microbiol Ecol., 87 : 543–555.

Drogue B., Sanguin H., Chamam A., Mozar M., Llauro C., Panaud O., Prigent-Combaret C., Picault N. and Wisniewski-Dyé F. Plant root transcriptome profiling reveals a strain-dependent response during Azospirillum-rice cooperation. Front. Plant Sci., 5:607.

Eme D., Malard F., Colson–Proch C., Jean P., Calvignac S., Konecny–Dupré L., Hervant F. and Douady C.J. Integrating phylogeography, physiology, and habitat modelling to explore species range déterminants. Journal of Biogeography, 41 : 687–699.

Eyenga P., Roussel D., Morel J., Rey B., Romestaing C., Teulier L., Sheu S.S., Goudable J., Négrier C. and Viale J.P. Early septic shock induces loss of oxidative phosphorylation yield plasticity in liver mitochondria. Journal of Physiology and Biochemistry. 70 : 285-296.

Fablet M., Akkouche A., Braman V. and Vieira C. Variable expression levels detected in the Drosophila effectors of piRNA biogenesis. Gene, 537:149-153.

Hervé V., Le Roux X., Uroz S., Gelhaye E. and Frey-Klett P. Diversity and structure of bacterial communities associated with Phanerochaete chrysosporium during wood decay. Env. Microbiol., 16(6) : 22238-2252.

Kyselková M., Almario J., Kopeck J., Ságová-Mare_ková M., Haurat J., Muller D., Grundmann G.L. and Moënne-Loccoz Y. Evaluation of rhizobacterial indicators of tobacco black root rot suppressiveness in farmers’ fields. Environ. Microbiol. Reports, 6(4) : 346-353.

Lavenir R., Petit S.M., Alliot N., Ribun S., Loiseau L., Marjolet L., Briolay J., Nazaret S. and Cournoyer B. Structure and fate of a Pseudomonas aeruginosa population originating from a combined sewer and colonizing a wastewater treatment lagoon. Environ Sci Pollut Res Int., 21(8) : 5402-5418

Legay N., Baxendale C., Grigulis K., Krainer U., Kastl E., Schloter M., Bardgett RD., Arnoldi C., Bahn M., Dumont M., Poly F., Pommier T., Clément JC. and Lavorel S. Contribution of above-and below-ground plant traits to the structure and function of grassland soil microbial communities. Annals of Botany, 114 : 1011-1021.

Merville A., Vallier A., Venner S., Siberchicot A., Fouchet D., Heddi A. and Bell-Venner M-C. Determining the instar of a larva : a parimonius method applied to weevil species. Eur. J. Entomol., 111 : 567–573.

Mondy N., Grossi V., Cathalan E., Delbecque J.P. and Douady C.J. Sterols and steroids in a freshwater crustacean (Proasellus meridianus) : hormonal response to nutritional input. Invertebrate Biology, 133(1) : 99-107.

Ramírez-Bahena M.H., Vial L., Lassalle F., Diel B., Chapulliot D., Daubin V., Nesme X. and Muller D. Single acquisition of protelomerase gave rise to speciation of a large and diverse clade within the Agrobacterium/Rhizobium supercluster characterized by the presence of a linear chromid. Mol Phylogenet Evol., 73 : 202-7.

Raymann K., Forterre P., Brochier-Armanet C. and Gribaldo S. Global Phylogenomic Analysis Disentangles the Complex Evolutionary History of DNA Replication in Archaea Genome. Biol Evol. 6(1) : 192.

Regnault C., Worms I.A., Oger-Desfeux C., MelodeLima C., Veyrenc S., Bayle M.L., Combourieu B., Bonin A., Renaud J., Raveton M. and Reynaud S. Impaired liver function in Xenopus tropicalis exposed to benzo[a]pyrene : transcriptomic and metabolic evidence. BMC Genomics, 15:666.

Rey B., Romestaing C., Bodennec J., Dumet A., Fongy A., Duchamps C. and Roussel D. Thyroid Status Affects Membranes Susceptibility to Free Radicals and Oxidative Balance in Skeletal Muscle of Muscovy Ducklings (Cairina moschata) . Journal of experimental zoology part A, 8 : 415-421.

Sen A., Daubin V., Abrouk D., Gifford I., Berry A.M. and Normand P. The phylogeny of actinobacteria revisited in the light of complete genomes, the orders Frankiales and Micrococcales should be split into coherent entities. Proposal of Frankiales ord. nov., Geodermatophilales ord. nov., Acidothermales ord. nov. and Nakamurellales ord. nov. Journal of systematic and evolutionary microbiology, 64 (11) : 3821-3832.

Teulier L., Rouanet J.L., Rey B. and Rousse, D. Ontogeny of non-shivering thermogenesis in Muscovy ducklings (Cairina moschata) . Comparative Biochemistry and Physiology, Part A. 175 : 82-89.

TroÏanowski M. Melot G. and Lengagne T. Multimodality : A way to cope with road traffic noise ? The case of European treefrog (Hyla arborea) . Behavioural Processes, 107 : 88–93. 

Vigneron A., Masson F., Vallier A., Balmand S., Rey M., Vincent-Monégat C., Aksoy E., Aubailly-Giraud E., Zaidman-Rémy A. and Heddi A. Insects recycle endsoymbionts when the benefit is over. Curr. Biol. 24 : 2267–2273.

Wardziak T., Oxarango L., Valette S., Mahieu-Williame L. and Joly P. Modelling skin surface areas involved in water transfer in the Palmate Newt (Lissotriton helveticus) . Canadian Journal of Zoology, 92 : 707-714. 

Youenou B., Brothier E. and Nazaret S. Diversity among strains of Pseudomonasaeruginosa from manure and soil, evaluated by multiple locus variable number tandem repeat analysis and antibiotic resistance profiles. Res Microbiol., 165(1):2-13.

Zallot R., Brochier-Armanet C., Gaston KW., Forouhar F., Limbach PA., Hunt JF. and de Crécy-Lagard V. Plant, Animal, and Fungal Micronutrient Queuosine Is Salvaged by Members of the DUF2419 Protein Family. ACS Chem Biol.,9(8) : 1812-1825.


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