2012

mercredi 14 janvier 2015

Les publications illustrent les collaborations scientifiques au sein de la FR BioEnviS.
Elles sont portées par au moins 2 unités de la FR et ont bénéficié des services des plateformes de celle-ci.

CAMPILLO T., C. LAVIRE, M. SHAMS, J. POTHIER, J. PULAWSKA. 2012. Detection and identification methods and new tests as developed and used in the framework of COST873 for bacteria pathogenic to stone fruits and nuts. Tumorigenic Agrobacterium spp. J Plant Pathol 94.94 :S1-97-S1-104.

PRIGENT-COMBARET C, ZGHIDI-ABOUZID O, EFFANTIN G, LEJEUNE P, REVERCHON S, NASSER W. (2012) The nucleoid-associated protein Fis directly modulates the synthesis of cellulose, an essential component of pellicle-biofilms in the phytopathogenic bacterium Dickeya dadantii. Mol Microbiol 86:172-186.

Artigas J, Arts G, Babut M, Caracciolo Barra A, Charles S, Chaumot A, Combourieu B, Dahllöf I, Despréaux D, Ferrari B, Friberg N, Garric J, Geffard O, Gourlay-Francé C, HeinM, Hjorth M, Krauss M, De Lange H J, Lahr J, Lehtonen K K, Lettieri T, Liess M, Lofts S, Mayer P, Morin S, Paschke A, Svendsen C, Usseglio-Platera P, Van den Brink N, Vindimian E, Williams R. Towards a renewed research agenda in ecotoxicology, Environmental Pollution, vol. 160 pp.201-206.

Kremer N, Charif D, Henri H, Gavory F, Wincker P, Mavingui P, Vavre F. Influence of Wolbachia on host gene expression in an obligatory symbiosis, BMC Microbiology, vol. 12 pp.S7-S7, DOI.

Minard G, Tran FH, Raharimalala F N, Hellard E, Ravelonandro P, Mavingui P, Moro C V. Prevalence genomic and metabolic profiles of Acinetobacter and Asaia associated with fieldcaught Aedes albopictus from Madagascar. FEMS Microbiology Ecology, vol. 83 pp.63-73.

Raharimalala F N, Ravaomanarivo L H, Ravelonandro P, Rafarasoa L S, Zouache K, Tran-Van V, Mousson L, Failloux A-B, Hellard E, Moro C V, Ralisoa B O, Mavingui P. Biogeography of the two major arbovirus mosquito vectors Aedes aegypti and Aedes albopictus (Diptera Culicidae) in Madagascar, Parasites & Vectors, vol. 5 pp.56-56

Prigent-Combaret, C., H. Sanguin, L. Champier, C. Bertrand, C. Monnez, C. Colinon, D. Blaha, J.M. Ghigo, and B. Cournoyer. The bacterial thiopurine methyltransferase tellurite resistance process is highly dependent upon aggregation properties and oxidative stress response. Environmental Microbiology 14:2645-2660

Cantarel A, Bloor J, Pommier T, Moirot C, Soussana JF, Poly F. 2012. Four years of experimental climate change modifies the microbial drivers of N2O fluxes in an upland grassland ecosystem. Global Change Biol. 18 : 2520-2531.

Bouffaud, M.L., Kyselková, M., Gouesnard, B., Grundmann, G., Muller, D. and Moënne-Loccoz, Y. (2012) Is diversification history of maize influencing selection of soil bacteria by roots ? Mol. Ecol., 21, 195-206.

Pujic P, Fournier P, Alloisio N, Hay AE, Maréchal J, Anchisi S, Normand P. 2012. Lectin genes in the Frankia alni genome. Arch Microbiol. Jan ;194(1):47-56.

Raquin V, Wannagat M, Zouache K, Legras-Lachuer C, Moro CV, Mavingui P. 2012. Detection of dengue group viruses by fluorescence in situ hybridization. Parasit Vectors. Oct 30 ;5:243

Walker, V., O. Couillerot, A. Von Felten, F. Bellvert, J. Jansa, M. Maurhofer, R. Bally, Y. Moënne-Loccoz, G. Comte. 2012. Variation of secondary metabolite levels in maize seedling roots induced by inoculation with Azospirillum, Pseudomonas and Glomus consortium under field conditions. Plant and Soil 356:151-163

Zouache, K., R.J. Michelland, A. Failloux, G.L. Grundmann, P. Mavingui. 2012. Chikungunya virus impacts the diversity of symbiotic bacteria in mosquito vector. Molecular Ecology 21:2297-2309

Damon, C., Lehembre, F., Oger-Desfeux, C., Luis, P., Ranger, J., Fraissinet-Tachet, L. and Marmeisse, R. (2012) Metatranscriptomics reveals the diversity of genes expressed by eukaryotes in forest soils. PLoS One, 7, e28967.

Frapolli, M., J.F. Pothier, G. Défago, and Y. Moënne-Loccoz. 2012. Evolutionary history of synthesis pathway genes for phloroglucinol and cyanide antimicrobials in plant-associated fluorescent pseudomonads. Molecular Phylogenetics and Evolution 63:877-890

Rondeau A., Mandon A., Malhautier L., Poly F. & Richaume-Jolion A. 2012. Biopurification of air containing a low concentration of TEX : comparison of removal efficiency unsing planted and non-planted biofilters. J. Chem. Technol. Biotech. 87 : 746-750 doi : 10.1002/jctb.3730

Babut M, Lopes C, Pradelle S, Persat H, Badot PM. BSAFs for freshwater fish and derivation of a sediment quality guideline for PCBs in the Rhone basin France, Journal of Soils and Sediments, vol. 12 pp.241-251

Billoir, E., Delhaye, H., Forfait, C., Clément, B., Triffault-Bouchet, G., Charles, S., Delignette-Muller, L., 2012 - Comparison of bioassays with different exposure time patterns : The added value of dynamic modelling in predictive ecotoxicology. Ecotoxicology and Environmental Safety, 75 : 80–86.

Lopes C, Persat H, Babut M. Transfer of PCBs from bottom sediment to freshwater river fish : a food-web modelling approach in the Rhone River (France) in support of sediment management, Ecotoxicology and Environmental Safety, vol. 81 pp.17-26.

Marmonier, P., Archambaud, G., Belaidi, N., Bougon, N., Breil, P., Chauvet, E., Claret, C., Cornut, J., Datry, T., Dole-Olivier, M.J., Dumont, B., Flipo, N., Foulquier, A., Gerino, M., Guilpart, A., Julien, F., Maazouzi, M., Martin, D., Mermillod-Blondin, F., Montuelle, B., Namour, P., Navel, S., Ombredane, D., Pelte, T., Piscart, C., Pusch, M., Stroffek, S., Robertson, A., Sanchez-Pérez, J.M., Sauvage, S., Taleb, A., Wantzen, M., Vervier, P., 2012 - The role of organisms in hyporheic processes : gaps in current knowledge, needs for future research and applications. Annales de Limnologie, International Journal of Limnology, 48 : 253-266.

Salin, K., Roussel, D., Rey, B., Voituron, Y., 2012 - David and Goliath : A mitochondrial coupling problem ? Journal of Experimental Zoology, Part A : Ecological Genetics and Physiology 317 : 283-293.

Mondy N, Rey B, Voituron Y. The proximal costs of case construction in caddisflies : antioxidant and life history responses, The Journal of Experimental Biology, vol. 215 pp.3453-3458

Salin K, Luquet E, Rey B, Roussel D, Voituron Y. Alteration of mitochondrial efficiency affects oxidative balance development and growth in frog (Rana temporaria) tadpoles, The Journal of Experimental Biology, vol. 215 pp.863-869.

Teulier L, Dégletagne C, Rey B, Tornos J, Keime C, de Dinechin M, Raccurt M, Rouanet JL, Roussel D, Duchamps C. Selective upregulation of lipid metabolism in skeletal muscle of foraging juvenile king penguins : an integrative study, Proceedings of the royal society B-Biological sciences, vol. 279 pp.2464-2472.

"Pelisson P-F, Bel-Venner MC, Rey B, Burgevin L, Martineau F, Fourel F, Lecuyer C, Menu F, Venner S. 2012 Contrasted breeding strategies in four sympatric sibling insect species : when a proovigenic and capital breeder copes with a stochastic environment, Functional Ecology, vol. 26 pp.198-206, DOI

Klein C.C., Cottret L., Kielbassa J., Charles H., Gautier C., Ribeiro de Vasconcelos A.T., Lacroix V., Sagot M.F., 2012. Exploration of the core metabolism of symbiotic bacteria. BMC Genomics, 13 : 438 (17 p.).

Vigneron A., Charif D., Vincent-Monégat C., Vallier A., Gavory F., Wincker P., Heddi A., 2012. Host gene response to endosymbiont and pathogen in the cereal weevil Sitophilus oryzae. BMC Microbiology, 12(Suppl 1) : S14.

Kremer N, Charif D, Henri H, Gavory F, Wincker P, Mavingui P, Vavre F. 2012. Influence of Wolbachia on host gene expression in an obligatory symbiosis. BMC Microbiol. Jan 18 ;12 Suppl 1:S7.

Muyle, A., Zemp, N., Deschamps, C., Mousset, S., Widmer, A. and Marais, G.A. (2012) Rapid de novo evolution of X chromosome dosage compensation in Silene latifolia, a plant with young sex chromosomes. PLoS Biol., 10, e1001308.

Plancq, J., Grossi, V., Henderiks, J. Simon, L., Mattioli, E., 2012 - Alkenone producers during late Oligocene–early Miocene revisited. Paleoceanography, 27 : 1-12.

Achurra A., Creuzé des Châtelliers, M., Rodriguez, P., 2012 - Troglodrilus jugeti n. sp. (Annelida, Clitellata, Tubificinae), a new stygobiont oligochaete species from south-western Europe. Zootaxa, 3229 : 35–46.

Martinez-Ansemil, E., Creuzé des Châtelliers, M., Martin P., Sambugar, B., 2012 - The Parvidrilidae – a diversified groundwater family : description of six new species from southern Europe, and clues for its phylogenetic position within Clitellata (Annelida). Zoological Journal of the Linnean Society, 166 : 530–558.

Tuekam Kayo R., Marmonier P., Zebaze Togouet S.H., Nola M. & Piscart C. (2012). An annotated checklist of freshwater stygobiotic crustaceans of Africa and Madagascar. Crustaceana, 85 : 1613-1631.

Luquet, E., Garner, T.W.J., Léna, J.P., Bruel, C., Joly, P., Lengagne, T., Grolet, O., Plénet, S., 2012 - Genetic erosion in wild populations makes resistance to a pathogen more costly. Evolution, 66(6) : 1942-1952.

BARTIROMO A., GUIGNARD G., BARONE LUMAGA M.R., BARATTOLO F., CHIODINI G., AVINO R., GUERRIERO G. BARALE G. Influence of volcanic gases on the epidermis of Pinus halepensis Mill. in Campi Flegrei, Southern Italy : A possible tool detecting volcanism in present and past floras. Journal of Volcanology and Geothermal Research, 233-234 : 1-17

GIRARD, V., PHILIPPE, M., GOMEZ, B., FERRY, S. Using charcoalified early angiosperm wood for palaeoecological reconstruction. Revista Española de Palaeontologia, 27 (1) : 29-44.

NERAUDEAU, D., ALLAIN, R., BALLEVRE, M., BATTEN, D., BUFFETAUT, E., COLIN, J.-P., DABARD, M.P., DAVIERO-GOMEZ, V., EL ALBANI, A., GOMEZ, B., GROSHENY, D., LE LOEUFF, J., LEPRINCE, A., MARTIN-CLOSAS, C., MASURE, E., MAZIN, J.-M., PHILIPPE, M., POUECH, J., TONG, H., TOURNEPICHE, J.-F., VULLO, R. The Hauterivian-Barremian lignitic bone bed of Angeac (Charente, SW France) : stratigraphical, palaeobiological and palaeogeographical implications. Cretaceous Research, 37 : 1-14.

Bartiromo A., Barale G., Barone Lumaga M.R., Bravi S., Barattolo F., 2012 – A new Early Cretaceous Flora from Cusano Mutri, Benevento, Southern Italy. Cretaceous Research, 30 : 1-19.

Nishimura, t.D., takai, M., senut, B., taru, H., maschenko, E.N., prieur, A. 2012. Reassessment of dolippithecus (kanagawapithecus) leptopostorbitalis, a colobine monkey from the late pliocene of japan. journal of human evolution, 62

Ramdarshan, A., Merceron, G., Marivaux, L. 2012. Spatial and temporal ecological diversity amongst Eocene Primates of France : evidence from teeth. American Journal of Physical Anthropology, 147 (2

Touzeau, A., Lefebvre, B., Nardin, E., Gillard, M. 2012. Echinodermes de l’ordovicien supérieur (katien) des corbières (aude, France). bulletin de la société d’études scientifiques de l’aude, tome CXII

Buffetaut, E., Angst, D. 2012. New evidence of a giant bird from the Late Cretaceous of France. Geological magazine, 150 (1).

Lukedener, A., Uchman, A., Gaillard, C., olivero, D. 2012. The late Barremian Halimedides horizon of the Dolomites (Southern Alps, Italy). Cretaceous Research, 35.

Cariou, E., Enay, r., AlmérAs, Y. 2012. Découverte d’une faune d’ammonites callovienne dans les Spiti Shales himalayens à Spiti et chronostratigraphie comparée des successions du Jurassique moyen et supérieur de Spiti et du Népal central (Thakkhola). Comptes rendus de l’Académie des Sciences. Série 2. Sciences de la terre et des planètes, 322 (10).

Hugueney, M., mein, p., maridet, o. 2012. Revision and new data on the Early and Middle Miocene soricids (Soricomorpha, Mammalia) from Central and South-Eastern France. Swiss Journal of Palaeontology, 131 (1).

Kaya, T.T. et al. 2012. Serefköy-2, a new Late Miocene mammal locality from the Yatagan Formation, Mugla, SW Turkey. comptes rendus palevo, 11

Kroger, B., Lefebvre, B. 2012. Palaeogeography and palaeoecology of early Floian (Early Ordovician) cephalopods from the Upper Fezouata Formation, Anti-Atlas, Morocco. Fossil Record, 15 (2).

Pavia, M., Gohlich, U.B., Mourer-chauviré, C. 2012. Description of the type-series of Palaeocryptonyx donnezani Deperet, 1892 (Aves : Phasianidae) with the selection of a lectotype. Comptes Rendus Palevol, 11 (4

Servais, t., antoinE, p.O., danelian, T., lefevbre, B., meyer-berthaud, B. 2012. Paleontology in France : 200 years in the footsteps of Cuvier and Lamarck. Palaeontologia Electronica 15 (1).

COSTECHAREYRE D., BALMAND S., CONDEMINE G., RAHBÉ Y. (2012) Dickeya dadantii, a plant pathogenic bacterium producing Cyt-like entomotoxins, causes septicemia in the pea aphid Acyrthosiphon pisum. PLoS One 7(1) : e30702.

ATLAN D, COUPAT-GOUTALAND B, RISLER A, REYROLLE M, SOUCHON M, BRIOLAY J, JARRAUD S, DOUBLET P, PÉLANDAKIS M. (2012) Micriamoeba tesseris nov.gen.nov.sp. : A new taxon of free-living small-sized amoebae non-permissive to virulent Legionellae. Protist 163 : 888-902

Bartolucci F, Peruzzi L, 2012 - Typification of Fritillaria tubiformis Gren. & Godr., Fritillaria delphinensis f. moggridgei Planch. and Fritillaria delphinensis var. burnatii Planch. (Liliaceae) from SW Europe. Candollea, 67(1) : 23-29.

Chiron G., Guiard J., Van den Berg C., 2012 – Phylogenetic relationships in Brazilian Pleurothallis sensu lato ( Pleurothallinidae, Orchidaceae) : evidence from nuclear ITS rDNA sequences. Phytotaxa 46 : 34-58

Frey D.J., Haag Ch.R., Kozlowski G., Tison J.M., Mraz P., 2012 – High genetic and morphological diversity despite range contraction in the diploid Hieracium eriophorum (Asteracea) endemic to the coastal sand dunes of South-West France. Bot. Journal of the Linnean Society, 169 : 365-377.

Dubruille R, Marais GA, Loppin B. Repeated evolution of testis-specific new genes : the case of telomere-capping genes in Drosophila. Int J Evol Biol, 2012:708980.

Mangold, C., martin, a., prieur, A. 2012. Périsphinctidés du Bathonien moyen et supérieur du mâconnais (Saône-et-Loire, France). Docum. Lab. Géol. Lyon, 169

Archila F., Chiron G., 2012 – Addition à la flore du Guatemala : Vanilla esquipulensis (Orchgidaceae), espèces des forêts xérophytes. Richardiana, XIII : 3-12.

Chiron G., Sanson N., 2012 – Une nouvelle espèce de Pabstiella (Orchidacae, Pleurothallidinae) du Brésil. Richardiana, XII(2) : 92 – 97.

Chiron G., Van den Berg C., 2012 – Révision taxonomique du genre Acianthera (Orchidaceae, Pleurothallidinae). Richardiana, XII (2) : 59-77.

Chiron G., 2012 – Un nouveau genre brésilien dans la sous-tribu Pleurothallidinae (Orchidacae), avec un nouvelle espèce, Richardiana, XII(2) : 78- 91.

Chiron G., Archila F., 2012 - Notes taxinomiques sur le complexe « Acianthera aphthosa » au Brésil. Richardiana, XIII : 39-53.

Chiron G., Petini-Benelli A., 2012 – Une nouvelle espèce d’Acianthera (Orchidacea, Pleurothallidinae) du Mato Grosso (Brésil). Richardiana, XIII : 65-70.

Chiron G., Sanson N., Guiard J., 2012 – Deux nouvelles espèces d’Octomeria (Orchidacea, Pleurothallidinae) d’Espirito Santo (Brésil). Richardiana, XIII : 54-64.

Devesa J.A., Lopez E., Invernon V.R., Lopez G., 2012 – Centaurea sect. Calcitrapa (Heister ex Fabr.) DC. En la Peninsula iberica. Lagascalia, 32 : 241-260.

Duhem B., 2012 - Compléments descriptifs sur Peniophorella incrustatissima et note sur une espèce de Peniophorella. Bull. Soc. Mycol. France, 128(1-2) : 121-126.

Duhem B., 2012 – Etudes morphologiques de plusieurs Sistitrema Gléocystidiés, Bull. Soc. Mycol. Fr, 128(1-2) : 17-51.

Rivero-Guerra A.O., 2012 – Santolina orocarpetana sp. nov. (Asteracea : Anthemideae) a new species from the Iberian Peninsula. Revision of the lectotype of S. oblongifolia Boiss.. Adansonia, ser. 3, 34(1) : 133-154.

Rivoire B., 2010 - Antrodia pulverulenta (Basidiomycota, polypore), une espèce nouvelle produisant des amas de mitospores blanches. Bull. mens. Soc. Linn. Lyon, 79(7-8) : 185-190.


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  • 2012